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publications
ConVarT: a search engine for matching human genetic variants with variants from non-human species
Published in Nucleic Acids Research, 2021
Recommended citation: Mustafa S Pir, Halil I Bilgin, Ahmet Sayici, Fatih Coşkun, Furkan M Torun, Pei Zhao, Yahong Kang, Sebiha Cevik, Oktay I Kaplan
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ConVarT: a new search engine for orthologous variants for functional inference of human genetic variants
Published in EUROPEAN JOURNAL OF HUMAN GENETICS, 2022
Recommended citation: Mustafa S Pir, Halil I Bilgin, Ahmet Sayici, Fatih Coskun, Furkan M Torun, Pei Zhao, Yahong Kang, Sebiha Cevik, Oktay I Kaplan
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ConVarT: Search Engine for Missense Variants Between Humans and Other Organisms
Published in Current Protocols in Bioinformatics, 2022
Recommended citation: Mustafa S Pir, Sebiha Cevik, Oktay I Kaplan
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Matching variants for functional characterization of genetic variants
Published in G3 Genes|Genomes|Genetics, 2023
Recommended citation: Sebiha Cevik, Pei Zhao, Atiyye Zorluer, Mustafa S Pir, Wenyin Bian, Oktay I Kaplan
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WDR31 is a novel ciliopathy protein displaying functional redundancy with GTPase-activating proteins ELMOD and RP2 in recruiting BBSome to cilium
Published in Life Science Alliance, 2023
Recommended citation: Sebiha Cevik, Xiaoyu Peng, Tina Beyer, Mustafa S Pir, Ferhan Yenisert, Franziska Woerz, Felix Hoffmann, Betul Altunkaynak, Betul Pir, Karsten Boldt, Asli Karaman, Miray Cakiroglu, S Sadik Oner, Ying Cao, Marius Ueffing, Oktay I Kaplan
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talks
Functional Characterization of Joubert Syndrome Associated CEP41
Published:
Authors: Pir MS, Cevik S, Kaplan OI
ConVarT: a new search engine for orthologous variants for functional inference of human genetic variants
Published:
Authors: Mustafa S. Pir, Halil I. Bilgin, Ahmet Sayıcı, Fatih Coşkun, Furkan M. Torun, Pei Zhao, Yahong Kang, Sebiha Çevik, Oktay I. Kaplan
ConVarT: a search tool for orthologous variants and functional inference of human genetic variants
Published:
Authors: Mustafa S. Pir, Halil I. Bilgin, Ahmet Sayıcı, Fatih Coşkun, Furkan M. Torun, Pei Zhao, Yahong Kang, Sebiha Çevik, Oktay I. Kaplan
Enhancing Functional Maturation of iPSC-derived Endodermal Hepatic Organoid through Modified Culture Conditions
Published:
Authors: Akbari S., Pir MS., Agaca C N., Altınay FM., Celik E., Karabicici M., Sutlu T., Sezerman U., Erda E.
Leveraging AlphaFold Computed Structures for Pathogenicity Classification
Published:
Authors: Mustafa Samet Pir, Ugur Sezerman and Emel Timucin
teaching
CRISPR/Cas9 workshop
Hands on demonstration of CRISPR/Cas9 in bacteria, Eskişehir, Turkey, 2019
Role: Hands on demonstration of CRISPR/Cas9 in bacteria
Genetics class
Teaching Assistant, Kayseri, Turkey, 2019
Role: Teaching Assistant